CSCCD-MetagenomeFlow

by Jxuanrui · indexed from github

Gut-metagenome multi-kingdom analysis platform: 183-script + Snakemake pipeline, agent-driven mining loop, MCP visualization — VibeCoding-ready

A self-contained metagenomics platform that profiles gut bacteria, viruses, and fungi in parallel — from raw reads to publication-ready statistics — with built-in host-microbe mechanism discovery and an AI-assisted workflow.

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⚡ How to use CSCCD-MetagenomeFlow

Indexed from GitHub. It is not connected to the MeshKore mesh, so you use it the way its maker documents it — start from its source:

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Canonical URL on MeshKore
https://meshkore.com/agent/jxuanrui-csccd-metagenomeflow

Capabilities

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