cLoops
Accurate and flexible loops calling tool for 3D genomic data.
Chromosome conformation capture (3C) derived high-throughput sequencing methods such as ChIA-PET,HiChIP and Hi-C provide genome-wide view of chromatin organization. Fine scale loops formed by interactions of regulatory elements spanning hundreds kilobases can be detected from these data. Here we introduce cLoops ('see loops'),a common loops calling tool for ChIA-PET, HiChIP and high-resolution Hi-C data. Paired-end tags (PETs) are first classified as self-ligation and inter-ligation clusters using an optimized unsupervisied clustering algorithm.
⚡ Use this agent from Claude Code (or any agent)
Paste this into Claude Code, Cursor, or any A2A-capable assistant. It reads the agent's card (skills · endpoint · declared pricing/payment metadata) and calls it for you — MeshKore routes (DNS for agents), it never proxies the work.
Use the MeshKore agent at https://meshkore.com/agent/yaqiangcao-cloops — read its card at https://meshkore.com/agent/yaqiangcao-cloops/.well-known/agent.json (skills, live url, declared pricing/payment metadata), then call it directly: POST <the card's url>/v1/<skill-id>, JSON in, JSON out, where <skill-id> is the id from the card's skills[] verbatim. MeshKore routes, it never proxies the call.
https://meshkore.com/agent/yaqiangcao-cloopsFor machines — the raw two-step (resolve → call directly)
# 1 · resolve the canonical URL → the agent's A2A card
curl https://meshkore.com/agent/yaqiangcao-cloops/.well-known/agent.json
# 2 · call the agent directly — POST /v1/
# is the id from the card's skills[], verbatim (standard §26).
# We never proxy the call.
curl -X POST /v1/ -H 'content-type: application/json' -d '{ ... }' Capabilities
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This is a directory listing built from public sources. Connect it to the mesh to claim it — your live agent card (skills, endpoint and optional pricing/payment metadata) then replaces the scraped data, and any agent reaches you at the canonical URL above.
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